The  binary  rule  of  DNA

Wenjian  Zhou

( The barley Center of Zhejiang Academy of Agriculture Science,

No.198 Shiqiao Road, Hangzhou,  Zhejiang province, China,  P C: 310021 )[1]

Abstract

It is well known, life is composed of protein, and protein is composed of amino acid, amino acid is controled by DNA.

Then, if we can make clear about the rule of sequence in DNA, secret of life will be discovered.

At present, two western biologists Warson and Cfick have gotten a macroscopical qualitative rule about DNA, -- the famous “ Double helix frame “. Base on it, almost all of biologists of different countries pay theirs attention into quantitative studying on pieces of DNA and studying genes quantitatively in the field of molecular biology. And the main study technique is analyzing sequence of genes through modern instrument-code of DNA. However, what can we gain from this scrap data of the research? How can we apply it into practice? Can we understand the essence of rule in DNA in a whole through it?

If we consider this question resorting to the eastern philosophy wisdom of whole eyesight, especially is the way from“ YiJing ”—a book discovering the change of nature, we will get a surprise result, that is, DNA codes are a group of very exact and regular binary numbers. However, I don’t know how to use this discover till now. The further problem is, what control the code of DNA, and make it compose by binary rule? It is a kind of certain information, and information is something “invisible“.

Key word: protein, amino acid, DNA, binary.

A. Foreword

One time, when I was reading a book that is the best abstract about Chinese philosophy thought and culture headstream named “ YiJing “, found by chance that there is a few relation between its rule and DNA code, studied it carefully, and found that the DNA is a group of data code which is formed by binary rule.

It is why I wrote such a article, maybe it is not fitting requests of technical paper, but perhaps persons will get some elicitation from here and be benefit to their professional work.

Let’s have a simple review at some basic knowledge about DNA which was in middle school biology text.

We know, very important in cell is chromosome, it control the character and propagating of cell. But chromosome just is the carrier, what work really in it is DNA molecule, it is existing as a frame of “ Double Screw Frame”, which list both side are phosphate molecule and to oxigenate ribose molecule, this is the same to all DNA, the part which control information are the different order of alkali-basis which hide in the middle. These four DNA-bases are adenine A Guanine G cytosine C and thymine T, respectively, and the rule of that they make a partnership is A to T and G to C, this is named “ Centraldogma “ the rule of DNA-bases partnership and supplementing each other.

In fact, DNA-base is carrier too, the “list order” of DNA-bases is the real descendiblity information.  And we know, “ order” itself is “ empty, nothing”. It is obvious that it is the very “empty, nothing” information controls the tangible substance list and frame. This also shows out the relation quiddity of image and number （ relation of “Xiang” and “Shu” saying in Chinese term ）: It is nothing itself, but it controls the image.

One side, DNA distribute itself into two son-cells averagely by copy itself, so realize itself descendiblity, on the other side, it control the character of life-form through controlling protein composing, DNA controls protein composing by transferring its information from karyon to cytoplasm through the course of re-record of RNA. In messenger RNA, replace T with U to make partnership with A. in ribosome of cytoplasm, take the RNA as a model , carry the dissociative amino acid onto ribosome by transfer RNA , then list the amino-acid and compose it as protein according to the bases list order of RNA, there are three RNA-bases transfer make partnership with RNA, the other top load dissociative amino acid.

Above is referencing the knowledge of descendiblity and aberrance of biology text of senior middle school. It wrote in the end of this chapter, protein is composed by 20 sorts of amino acid which are being common, thus here is a problem of that how four sorts DNA-bases to decide twenty sorts of amino acid, people have made this problem clear elementarily these years, that is, decide a amino acid by different list order of three DNA-bases. Now people have checked out all the 20 sorts of amino acid code as below table.

20  Sorts of amino acid and their codes

Let’s look at this table, there are two obvious shortcoming on this table:

1. the codes of that decide amino acid are disorder and irregular, there is  1 , 2, 3, 4, and 6 .

2. the total number of codes in this table are 61, and according to mathematical calculate, the total feasibilities of that fetch 3 from 4 DNA-bases amino acids to make permutation and combination should be 64 sorts, it is possible here lost three codes. So this table is not orderly and complete in fact, according conclusion , there should be 64 sorts codes total.

B.  Ratiocination on binary

Say simply, there are two sorts of nucleotide : purin and pyrimidine, among them, purin are divided as adenine A and Guanine G; pyrimidine are divided as cytosine C and thymine T.

We may suppose: adenine A = 1, Guanine G = 2, cytosine C = 3, thymine T = 4 .

If we express them by binary number as below: A = 00, G = 01, C = 10, T = 11.

Then we replace the corresponding nucleotide name of the two tables into binary number.

20 amino acid and their codes

16 sorts amino acid and their codes ( reformed )

Then list the total codes according to its order, and express them by natural number respectively.

Then list the total codes according to its order, and express them by nucleotide name, respectively.

That is to say, the 16 sorts amino acid what expressed by 64 nucleotides just are a list of natural number of 6 binary number which are composed by 4 DNA-bases, and it has 64 numbers from 1 to 64 total. Namely 2 ⁶ = 64 , this just is all of the secret of biology, and the secret of whole nature or world !  Let’s turn back to have a look at the old table, then express it as natural number , to see what secret is there:

We may see from above table, so-called amino acid codes, it is breaking the order of the 64 numbers from 1 — 64 then pick a piece of them put down casually.

Then it is who broken it in the end?  Only can be the God . But we are wrong again, the God hasn’t broken it himself , it is mankind ourselves who broken it when we study it, because the course of experimentation always are single and disorder. In fact, the God distribute every life including any life from virus to us person a only number for recognizing, just like ours citizen ID card number, just this ID number which the God give us is more long, but its basic unit is more simple in fact !  There just are 0 and 1 two numbers, and mankind citizen ID is 15 digital number composed by 0 to 9 these ten numbers. If the calculation speed of computer is fast enough , suppose we will have a kind of quanta computer, then whether we can find out all ID of life in the world? But I think the ID number of life is only, it is no use in fact. The most important is to sum up the rule of how the God compile these code, and the same part in this long coding, and in fact, this rule is showed clearly: all lift have their mutual forebear, and the ultimate of this mutual forbear is very simple really, that is 0 and 1 these two number, and it can be sum up to 0, even the 0 is not exist too, this is the mutual thought of Chinese thinker, it perhaps will disappointed those west scientists who are ambitious !

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